Cryptanalysis
This section documents the ways in which many cryptographic ciphers can be cryptanalysed and broken. The easiest ciphers to break are the ones which have existed for a long time. With this in mind, we will be focussing on classical ciphers, as these will be the easiest to explain.
This page provides a very general overview of the methods and techniques used to cryptanalyse just about any algorithm that enciphers text. Much of this will be slightly mathematical, but we will try to provide programs for everything. This means that in the event that you don't completely understand the theory of a technique, you should still be able to use it.
Most of the techniques described here will not work on modern cryptographic algorithms, so if this is what you are looking for, you will probably have more success looking elsewhere.
Much of the fun with these algorithms lies in cracking them. Some of the simpler algorithms such as the caesar cipher and the substitution cipher can be solved by hand, while others like the ADFGVX and the trifid cipher are more easily solved with the help of a computer.
What different methods are there?

Cipher Implementations
This section will include implementations of common classical ciphers in various languages.

Specific Examples
The examples in this section will describe techniques for cryptanalysis of specific ciphers. These examples will focus on automated techniques i.e. techniques for using a computer to break ciphers. In general these techniques will be different from those used to break ciphers by hand.
 Cryptanalysis of the Affine Cipher
 Cryptanalysis of the Autokey Cipher
 Cryptanalysis of the Bifid cipher
 Cryptanalysis of the Caesar Cipher
 Cryptanalysis of the Columnar Transposition Cipher
 Cryptanalysis of the Foursquare Cipher
 Cryptanalysis of the Hill Cipher
 Cryptanalysis of the Playfair cipher
 Cryptanalysis of the Simple Substitution Cipher
 Cryptanalysis of the Vigenere Cipher
 Cryptanalysis of the Vigenere Cipher, Part 2

Text Characterisation
When cryptanalysing ciphers, we usually try many 'candidate' keys until a key is found that results in a readable output. Text Characterisation is a way of automatically determining how close a piece of text is to natural english, which can be used as an aid to a cryptanalyst, or as a component in automatic code cracking software.

Breaking Machine Ciphers
This section will deal with cryptanalysis of slightly more advanced ciphers such as Enigma and M209 used during the second world war. These are a fair bit more complicated than the simple examples provided elsewhere, however they still rely heavily on the techniques developed such as hill climbing, using the Index of Coincidence, and quadgram statistics.

Letter Frequencies for Various Languages
Provides ngram models for several languages.

Modern Cryptanalysis
This section will deal with breaking modern ciphers, the methods presented here don't have much in common with the classical techniques and are much more mathematical in general.